logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001380_13|CGC2

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001380_03048
Beta-hexosaminidase
CAZyme 21309 23750 - GH3
MGYG000001380_03049
L-arabinose transport system permease protein AraQ
TC 23833 24681 - 3.A.1.1.2
MGYG000001380_03050
Lactose transport system permease protein LacF
TC 24681 25637 - 3.A.1.1.4
MGYG000001380_03051
hypothetical protein
null 25728 27107 - No domain
MGYG000001380_03052
HTH-type transcriptional activator RhaR
TF 27249 27989 + HTH_AraC+HTH_AraC
MGYG000001380_03053
Cellobiose phosphorylase
CAZyme 28094 30793 - GH94
MGYG000001380_03054
N,N'-diacetylchitobiose phosphorylase
CAZyme 30816 33230 - GH94
MGYG000001380_03055
hypothetical protein
null 33513 33632 - No domain
MGYG000001380_03056
hypothetical protein
null 33779 34126 - TnpV
MGYG000001380_03057
putative manganese efflux pump MntP
TC 34515 35081 + 2.A.107.1.2
MGYG000001380_03058
Fe(2+) transporter FeoB
TC 35152 37482 - 9.A.8.1.6
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is beta-glucan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001380_03048 GH3_e161|3.2.1.58|3.2.1.37|3.2.1.21|3.2.1.- xylan|beta-glucan
MGYG000001380_03053 GH94_e5|2.4.1.31 beta-glucan
MGYG000001380_03054 GH94_e10|2.4.1.49 cellulose

Substrate predicted by dbCAN-PUL is cellobiose download this fig


Genomic location